Y Chromosomal Haplogroups in Myanmar:Retrieving Y chromosomal haplogroup trees u

[sahaliyan]

Min-Sheng Peng et al
Phylogenetically informative Y chromosomal single-nucleotide polymorphisms (Y-SNPs) integrated in DNA chips have not been sufficiently explored in most genome-wide association studies (GWAS). Herein, we introduce a pipeline to retrieve Y-SNP data. We introduce the software YTool (http://mitotool.org/ytool/) to handle conversion, filtering, and annotation of the data. Genome-wide SNP data from populations in Myanmar are used to construct a haplogroup tree for 117 Y chromosomes based on 369 high-confidence Y-SNPs. Parallel genotyping and published resequencing data of Y chromosomes confirm the validity of our pipeline. We apply this strategy to the CEU HapMap data set and construct a haplogroup tree with 107 Y-SNPs from 39 individuals. The retrieved Y-SNPs can discern the parental genetic structure of populations. Given the massive quantity of data from GWAS, this method facilitates future investigations of Y chromosome diversity.
http://www.nature.com/ejhg/journal/vaop/ncurrent/abs/ejhg2013272a.html

[sahaliyan]

[asan-kaygy]

Thank you.
Do you have full version of article?

[sahaliyan]

No,but one thing to note,8Y2897（2010-08-Y-2897）is same as F363 found by Fudan(equal to F148 or Oα),downstream of M117

[Asmat headhunter]

Доминируют O3a2c-8Y2897 и O2a1*-M95. Первая, возможно, связана с тибето-бирманскими миграциями? Вторая - аустроазиатские аборигены?

[Шад]

[Yurgan]

Откуда дровишки? 
Дерево то есть?
Я не нашел в приложениях.

[Шад]

Откуда дровишки? 
Дерево то есть?
Я не нашел в приложениях.

В тексте статьи есть:)

[Yurgan]

Откуда дровишки? 
Дерево то есть?
Я не нашел в приложениях.

В тексте статьи есть:)

Но не все могут эту статью получить 

[Valery]

софт у них говеный