АвторТема: M117 geno 2.0 results  (Прочитано 2909 раз)

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M117 geno 2.0 results
« : 13 Декабрь 2012, 14:43:14 »
http://www.familytreedna.com/public/o3/default.aspx?section=ysnp
CTS1034+, CTS10362+, CTS10436+, CTS10713+, CTS10736+, CTS10738+, CTS10753+, CTS109+, CTS11085+, CTS11109+, CTS11358+, CTS11454+, CTS11575+, CTS11580+, CTS11726+, CTS11742+, CTS11844+, CTS11856+, CTS12099+, CTS12173+, CTS125+, CTS12632+, CTS1275+, CTS12876+, CTS1996+, CTS2080+, CTS2223+, CTS230+, CTS2338+, CTS2340+, CTS2447+, CTS2861+, CTS295+, CTS3234+, CTS3251+, CTS3255+, CTS3331+, CTS335+, CTS3431+, CTS3536+, CTS3647+, CTS3654+, CTS3662+, CTS3763+, CTS3771+, CTS3868+, CTS3914+, CTS3996+, CTS4111+, CTS4276+, CTS4364+, CTS4368+, CTS4443+, CTS4623+, CTS4714+, CTS4723+, CTS4740+, CTS477+, CTS5128+, CTS5318+, CTS5457+, CTS5458+, CTS5532+, CTS5580+, CTS5858+, CTS5866+, CTS6010+, CTS6135+, CTS6353+, CTS6383+, CTS6384+, CTS6623+, CTS6800+, CTS6891+, CTS6907+, CTS7453+, CTS7492+, CTS7859+, CTS7922+, CTS7933+, CTS7942+, CTS7951+, CTS8133+, CTS8153+, CTS8178+, CTS8236+, CTS8243+, CTS8244+, CTS8399+, CTS8746+, CTS8980+, CTS899+, CTS9096+, CTS947+, CTS9512+, CTS9548+, CTS9828+, F103+, F1046+, F113+, F1173+, F1209+, F1221+, F129+, F130+, F1300+, F1302+, F131+, F1320+, F1327+, F1329+, F1369+, F139+, F141+, F144+, F146+, F148+, F149+, F151+, F156+, F166+, F1704+, F1707+, F171+, F1714+, F175+, F1753+, F1754+, F176+, F1767+, F182+, F1831+, F1833+, F1842+, F1870+, F1882+, F2000+, F204+, F2048+, F2075+, F2137+, F2142+, F2150+, F2155+, F2177+, F2223+, F235+, F2402+, F246+, F2494+, F2503+, F2546+, F257+, F2587+, F2631+, F267+, F2688+, F27+, F2710+, F282+, F2837+, F2845+, F287+, F2887+, F2932+, F2985+, F299+, F2993+, F3035+, F3039+, F306+, F3111+, F3136+, F317+, F3187+, F3225+, F3335+, F3394+, F3397+, F341+, F342+, F3455+, F348+, F355+, F3556+, F3566+, F36+, F363+, F3692+, F3710+, F373+, F375+, F380+, F3948+, F3965+, F400+, F406+, F4131+, F415+, F417+, F42+, F422+, F427+, F4277+, F432+, F433+, F438+, F450+, F468+, F471+, F476+, F478+, F484+, F494+, F515+, F522+, F525+, F53+, F537+, F540+, F546+, F549+, F572+, F579+, F581+, F584+, F600+, F613+, F614+, F615+, F633+, F649+, F650+, F658+, F668+, F688+, F697+, F71+, F719+, F76+, F8+, F80+, F830+, F842+, F869+, F889+, F910+, F942+, F943+, F969+, L101+, L132+, L15+, L16+, L350+, L366+, L468+, L470+, L477+, L493+, L498+, L515+, L516+, L517+, L552+, L566+, L594+, L781+, M122+, M133+, M134+, M139+, M168+, M214+, M235+, M263+, M294+, M42+, M526+, M89+, M94+, P128+, P131+, P132+, P135+, P136+, P138+, P14+, P141+, P145+, P146+, P148+, P151+, P158+, P159+, P160+, P164+, P166+, P186+, P187+, P188+, P191+, P192+, P193+, P194+, P195+, P196+, P197+, P198+, P199+, P200+, P201+, PAGES00023+, PF1016+, PF1029+, PF1031+, PF1040+, PF1046+, PF1061+, PF1092+, PF1097+, PF110+, PF1203+, PF1269+, PF1276+, PF15+, PF192+, PF210+, PF212+, PF223+, PF234+, PF258+, PF2591+, PF2593+, PF2599+, PF2600+, PF2608+, PF2611+, PF2615+, PF2624+, PF263+, PF2631+, PF2643+, PF272+, PF2745+, PF2747+, PF2748+, PF2749+, PF2770+, PF278+, PF292+, PF316+, PF325+, PF342+, PF4208+, PF4330+, PF500+, PF5061+, PF601+, PF667+, PF6868+, PF719+, PF720+, PF725+, PF7392+, PF779+, PF796+, PF803+, PF815+, PF821+, PF840+, PF844+, PF892+, PF937+, PF951+, PF954+, PF970+, V186+, V189+, V205+, V52+, V9+, Z148+, Z191+, Z365+

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Re: M117 geno 2.0 results
« Ответ #1 : 13 Декабрь 2012, 15:04:26 »
Dear sahaliyan, what new snips are presented in this paper?

Yi Chuan. 2012 Nov;34(11):1409-16.
[Screening and identification of 36 new STR loci in human Y chromosome].
[Article in Chinese]
Peng DB, Jiang ZW, Sun SP, Li CH, Lu DR.
SourceSchool of Life Science, Fudan University, Shanghai, China. pengdongbo@163.com

Abstract
133 candidate Y-STR loci were selected from NCBI STS database or by bioinformatics analysis in human Y-chromosome sequence, and were screened among 48 DNA samples around the world. Forty-one Y-STRs with high allelic frequency were validated, 36 of which were first reported. Two hundred haplotypes of the 41 STRs were identified among 200 randomly sampled male individuals in Shanghai, indicating 100% inter-individual discrimination. By network analysis of haplotypes of the 41 STRs among nine Jiang-surname male individuals with no consanguinity within 5 generations from a Jiang-surname individual gathering at Jiangshan, Zhejiang Province, and 7 Jiang-surname male individuals from the random shanghai population, 6 Jiang-surname individuals from Jiangshan were close with only 2-4 STR locus difference. These 41 Y-STR loci provide enough information by which individuals from each other with different early modern family origin can be effectively distinguished. This will promote studies on identification of non-lineal relationship in forensics, ancestry location of oversea Chinese, the surname origin and evolution, origin and migration of modern humans and many other studies of Contemporary Anthropology.

Оффлайн sahaliyanАвтор темы

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Re: M117 geno 2.0 results
« Ответ #2 : 13 Декабрь 2012, 15:20:20 »
Dear sahaliyan, what new snips are presented in this paper?

Yi Chuan. 2012 Nov;34(11):1409-16.
[Screening and identification of 36 new STR loci in human Y chromosome].
[Article in Chinese]
Peng DB, Jiang ZW, Sun SP, Li CH, Lu DR.
SourceSchool of Life Science, Fudan University, Shanghai, China. pengdongbo@163.com

Abstract
133 candidate Y-STR loci were selected from NCBI STS database or by bioinformatics analysis in human Y-chromosome sequence, and were screened among 48 DNA samples around the world. Forty-one Y-STRs with high allelic frequency were validated, 36 of which were first reported. Two hundred haplotypes of the 41 STRs were identified among 200 randomly sampled male individuals in Shanghai, indicating 100% inter-individual discrimination. By network analysis of haplotypes of the 41 STRs among nine Jiang-surname male individuals with no consanguinity within 5 generations from a Jiang-surname individual gathering at Jiangshan, Zhejiang Province, and 7 Jiang-surname male individuals from the random shanghai population, 6 Jiang-surname individuals from Jiangshan were close with only 2-4 STR locus difference. These 41 Y-STR loci provide enough information by which individuals from each other with different early modern family origin can be effectively distinguished. This will promote studies on identification of non-lineal relationship in forensics, ancestry location of oversea Chinese, the surname origin and evolution, origin and migration of modern humans and many other studies of Contemporary Anthropology.
i JUST read the paper,they have not use any SNPs in the paper,all about the Y-STR

Оффлайн Nimissin

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Re: M117 geno 2.0 results
« Ответ #3 : 13 Декабрь 2012, 15:22:54 »
Thank you!

Оффлайн sahaliyanАвтор темы

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Re: M117 geno 2.0 results
« Ответ #4 : 14 Декабрь 2012, 03:56:20 »
http://www.ranhaer.com/thread-22540-1-1.html
The guy 199578 Zheng(fjnj) said
FTDNA does not run a clean lab.  There are clear signs of contamination based on these false positive snps:

L477, L493, L498, L515-517, Z148, Z191, Z365.

There are other false positives.


and
26 F series snps were at the root of F.  It looks like a long bottle neck before the split into GH and IJK.

 

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