АвторТема: Harappa Ancestry Project  (Прочитано 16564 раз)

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Оффлайн galychanyn

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Re: Harappa Ancestry Project
« Ответ #30 : 04 Июль 2013, 01:28:30 »
Population    
S-Indian   -   
Baloch   5.94%
Caucasian   17.38%
NE-Euro   46.71%
SE-Asian   -   
Siberian   -   
NE-Asian   1.19%
Papuan   -   
American   0.20%
Beringian   0.71%
Mediterranean   24.49%
SW-Asian   3.36%
San   -   
E-African   -   
Pygmy   -   
W-African   -

Single Population Sharing:

#   Population (source)   Distance
1   hungarian (behar)   7.56
2   slovenian (xing)   7.56
3   n-european (xing)   10.19
4   utahn-white (1000genomes)   10.19
5   utahn-white (hapmap)   10.19
6   belorussian (behar)   15.2
7   ukranian (yunusbayev)   15.2
8   bulgarian (yunusbayev)   15.44
9   romanian-a (behar)   15.44
10   romany (harappa)   17.45
11   french (hgdp)   17.79
12   lithuanian (behar)   18.56
13   british (1000genomes)   20.14
14   orcadian (hgdp)   20.14
15   italian (hgdp)   21.75
16   mordovian (yunusbayev)   22.14
17   russian (hgdp)   22.14
18   spaniard (behar)   23.18
19   chuvash (behar)   25.14
20   ashkenazi (harappa)   27.82

Mixed Mode Population Sharing:

#       Primary Population (source)   Secondary Population (source)   Distance
1       57.3%    italian (hgdp)    +   42.7%    russian (behar)    @   3.24
2       60.6%    lithuanian (behar)    +   39.4%    tuscan (1000genomes)    @   3.83
3       90.2%    slovenian (xing)    +   9.8%    morocco-n (henn2012)    @   4.03
4       90.2%    hungarian (behar)    +   9.8%    morocco-n (henn2012)    @   4.03
5       90.2%    hungarian (behar)    +   9.8%    tunisia (henn2012)    @   4.03
6       90.2%    slovenian (xing)    +   9.8%    tunisia (henn2012)    @   4.03
7       65.5%    ukranian (yunusbayev)    +   34.5%    tuscan (1000genomes)    @   4.09
8       65.5%    belorussian (behar)    +   34.5%    tuscan (1000genomes)    @   4.09
9       61.5%    n-european (xing)    +   38.5%    bulgarian (yunusbayev)    @   4.19
10       61.5%    utahn-white (1000genomes)    +   38.5%    bulgarian (yunusbayev)    @   4.19
11       61.5%    utahn-white (1000genomes)    +   38.5%    romanian-a (behar)    @   4.19
12       61.5%    n-european (xing)    +   38.5%    romanian-a (behar)    @   4.19
13       78.4%    slovenian (xing)    +   21.6%    spaniard (behar)    @   4.2
14       81.6%    hungarian (behar)    +   18.4%    spaniard (1000genomes)    @   4.21
15       81.6%    slovenian (xing)    +   18.4%    spaniard (1000genomes)    @   4.21
16       90.4%    hungarian (behar)    +   9.6%    mozabite (hgdp)    @   4.27
17       90.4%    hungarian (behar)    +   9.6%    algeria (henn2012)    @   4.27
18       90.4%    slovenian (xing)    +   9.6%    algeria (henn2012)    @   4.27
19       90.4%    slovenian (xing)    +   9.6%    mozabite (hgdp)    @   4.27
20       90.8%    slovenian (xing)    +   9.2%    saharawi (henn2012)    @   4.44


Using 1 population approximation:
1 hungarian @ 8.084
2 slovenian @ 8.084
3 serbian @ 8.632
4 n-european @ 11.041
5 utahn-white @ 11.041
6 utahn-white @ 11.041
7 belorussian @ 16.529
8 ukranian @ 16.529
9 bulgarian @ 17.239
10 romanian-a @ 17.239
372 iterations.



Using 2 populations approximation:
1 50% italian +50% russian @ 5.069
2 50% russian +50% tuscan @ 5.558
3 50% russian +50% tuscan @ 5.558
4 50% russian +50% tuscan @ 5.558
5 50% bulgarian +50% n-european @ 5.716
6 50% bulgarian +50% utahn-white @ 5.716
7 50% bulgarian +50% utahn-white @ 5.716
8 50% n-european +50% romanian-a @ 5.716
9 50% romanian-a +50% utahn-white @ 5.716
10 50% romanian-a +50% utahn-white @ 5.716
69378 iterations.



Using 3 populations approximation:
1 50% russian +25% basque +25% cypriot @ 2.334
2 50% russian +25% cypriot +25% spain-basc @ 2.334
3 50% n-european +25% russian +25% sephardic-jew @ 2.412
4 50% utahn-white +25% russian +25% sephardic-jew @ 2.412
5 50% utahn-white +25% russian +25% sephardic-jew @ 2.412
6 50% russian +25% basque +25% turkish @ 2.635
7 50% russian +25% spain-basc +25% turkish @ 2.635
8 50% russian +25% azeri +25% basque @ 2.644
9 50% russian +25% azeri +25% spain-basc @ 2.644
10 50% russian +25% basque +25% turk @ 2.644
2297986 iterations.



Using 4 populations approximation:
1 french + lithuanian + russian + sephardic-jew @ 2.066
2 bulgarian + italian + n-european + russian @ 2.091
3 bulgarian + italian + russian + utahn-white @ 2.091
4 bulgarian + italian + russian + utahn-white @ 2.091
5 italian + n-european + romanian-a + russian @ 2.091
6 italian + romanian-a + russian + utahn-white @ 2.091
7 italian + romanian-a + russian + utahn-white @ 2.091
8 bulgarian + hungarian + russian + spaniard @ 2.105
9 bulgarian + russian + slovenian + spaniard @ 2.105
10 hungarian + romanian-a + russian + spaniard @ 2.105
11 romanian-a + russian + slovenian + spaniard @ 2.105
12 italian + lithuanian + russian + tuscan @ 2.259
13 italian + lithuanian + russian + tuscan @ 2.259
14 italian + lithuanian + russian + tuscan @ 2.259
15 basque + cypriot + russian + russian @ 2.334
16 cypriot + russian + russian + spain-basc @ 2.334
17 belorussian + french + russian + sephardic-jew @ 2.412
18 french + russian + sephardic-jew + ukranian @ 2.412
19 n-european + n-european + russian + sephardic-jew @ 2.412
20 n-european + russian + sephardic-jew + utahn-white @ 2.412
« Последнее редактирование: 04 Июль 2013, 01:37:11 от galychanyn »

Оффлайн valera27

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Re: Harappa Ancestry Project
« Ответ #31 : 10 Ноябрь 2013, 17:27:34 »
Мои результаты

Admix Results (sorted):

# Population Percent
1 NE-Euro 57.84
2 Mediterranean 17.6
3 Baloch 9.2
4 Caucasian 8.77
5 Siberian 3.02
6 S-Indian 1.42
7 SW-Asian 1.4
8 American 0.52
9 Papuan 0.22

Single Population Sharing:

# Population (source) Distance
1 ukranian (yunusbayev) 4.59
2 mordovian (yunusbayev) 6.77
3 belorussian (behar) 7.52
4 russian (behar) 9.15
5 russian (hgdp) 9.35
6 slovenian (xing) 10.42
7 hungarian (behar) 11.96
8 n-european (xing) 13.08
9 lithuanian (behar) 13.82
10 utahn-white (hapmap) 14.19
11 utahn-white (1000genomes) 16.08
12 orcadian (hgdp) 16.83
13 british (1000genomes) 17.29
14 chuvash (behar) 19.12
15 french (hgdp) 22.84
16 finnish (1000genomes) 25.77
17 romanian-a (behar) 25.77
18 bulgarian (yunusbayev) 27.67
19 italian (hgdp) 34.58
20 spaniard (behar) 34.65

Mixed Mode Population Sharing:

#   Primary Population (source) Secondary Population (source) Distance
1   66.6% mordovian (yunusbayev)  +  33.4% n-european (xing)  @  1.98
2   71.2% mordovian (yunusbayev)  +  28.8% utahn-white (1000genomes)  @  2.09
3   72.9% mordovian (yunusbayev)  +  27.1% british (1000genomes)  @  2.3
4   78.3% mordovian (yunusbayev)  +  21.7% french (hgdp)  @  2.53
5   72.8% mordovian (yunusbayev)  +  27.2% orcadian (hgdp)  @  2.66
6   56.6% russian (hgdp)  +  43.4% hungarian (behar)  @  2.9
7   87.7% mordovian (yunusbayev)  +  12.3% spain-basc (henn2012)  @  2.92
8   88.1% mordovian (yunusbayev)  +  11.9% basque (hgdp)  @  2.92
9   53% russian (hgdp)  +  47% slovenian (xing)  @  3.11
10   85.5% mordovian (yunusbayev)  +  14.5% spaniard (1000genomes)  @  3.12
11   72.1% russian (hgdp)  +  27.9% french (hgdp)  @  3.24
12   66.1% mordovian (yunusbayev)  +  33.9% hungarian (behar)  @  3.34
13   62.8% mordovian (yunusbayev)  +  37.2% slovenian (xing)  @  3.42
14   59.3% russian (hgdp)  +  40.7% n-european (xing)  @  3.61
15   64.6% russian (hgdp)  +  35.4% utahn-white (1000genomes)  @  3.78
16   91.4% mordovian (yunusbayev)  +  8.6% sardinian (hgdp)  @  3.78
17   86.5% ukranian (yunusbayev)  +  13.5% orcadian (hgdp)  @  3.81
18   80.2% russian (hgdp)  +  19.8% spaniard (behar)  @  3.84
19   69.5% ukranian (yunusbayev)  +  30.5% mordovian (yunusbayev)  @  3.89
20   88.8% ukranian (yunusbayev)  +  11.2% chuvash (behar)  @  3.93

Using 2 populations approximation:
 1 50% russian +50% slovenian @ 3.607
 2 50% hungarian +50% russian @ 3.729
 3 50% mordovian +50% n-european @ 4.177
 4 50% n-european +50% russian @ 4.456
 5 50% mordovian +50% ukranian @ 4.496
 6 50% mordovian +50% slovenian @ 4.619
 7 50% mordovian +50% utahn-white @ 4.724
 8 50% hungarian +50% lithuanian @ 4.773
 9 50% ukranian +50% ukranian @ 5.018
 10 50% russian +50% utahn-white @ 5.040
 71253 iterations.

 Using 3 populations approximation:
 1 50% mordovian +25% ukranian +25% utahn-white @ 1.793
 2 50% mordovian +25% orcadian +25% ukranian @ 1.953
 3 50% mordovian +25% n-european +25% ukranian @ 1.978
 4 50% mordovian +25% ukranian +25% utahn-white @ 1.981
 5 50% mordovian +25% british +25% ukranian @ 2.030
 6 50% mordovian +25% belorussian +25% utahn-white @ 2.189
 7 50% mordovian +25% belorussian +25% british @ 2.359
 8 50% mordovian +25% belorussian +25% utahn-white @ 2.425
 9 50% mordovian +25% british +25% russian @ 2.432
 10 50% mordovian +25% mordovian +25% utahn-white @ 2.446
 2838719 iterations.

 Using 4 populations approximation:
 1 mordovian + mordovian + ukranian + utahn-white @ 1.793
 2 mordovian + mordovian + orcadian + ukranian @ 1.953
 3 mordovian + mordovian + n-european + ukranian @ 1.978
 4 mordovian + mordovian + ukranian + utahn-white @ 1.981
 5 british + mordovian + mordovian + ukranian @ 2.030
 6 mordovian + russian + ukranian + utahn-white @ 2.114
 7 mordovian + russian + ukranian + utahn-white @ 2.180
 8 belorussian + mordovian + mordovian + utahn-white @ 2.189
 9 british + mordovian + russian + ukranian @ 2.282
 10 mordovian + n-european + russian + ukranian @ 2.298
 11 belorussian + british + mordovian + mordovian @ 2.359
 12 belorussian + mordovian + mordovian + utahn-white @ 2.425
 13 british + mordovian + mordovian + russian @ 2.432
 14 mordovian + mordovian + mordovian + utahn-white @ 2.446
 15 mordovian + mordovian + russian + utahn-white @ 2.502
 16 french + lithuanian + mordovian + mordovian @ 2.505
 17 mordovian + orcadian + russian + ukranian @ 2.525
 18 belorussian + mordovian + mordovian + n-european @ 2.526
 19 british + mordovian + mordovian + mordovian @ 2.535
 20 mordovian + orcadian + russian + ukranian @ 2.604

Оффлайн Stanislav S

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Re: Harappa Ancestry Project
« Ответ #32 : 22 Октябрь 2016, 18:55:35 »
1   NE-Euro   55.93
2   Mediterranean   19.68
3   Caucasian   8.45
4   Baloch   7.51
5   Siberian   3.74
6   SW-Asian   1.79
7   Beringian   1.26
8   S-Indian   1.08

1 ukranian @ 5.960608
2 mordovian @ 9.418520
3 slovenian @ 9.524267
4 belorussian @ 10.173080
5 hungarian @ 11.005743
6 n-european @ 11.752097
7 russian @ 11.781744
8 russian @ 12.037971
9 utahn-white @ 13.175627
10 utahn-white @ 15.091078
11 orcadian @ 16.471285
12 british @ 16.547722
13 lithuanian @ 17.293604
14 chuvash @ 20.080387
15 serbian @ 20.858282
16 french @ 22.041670
17 romanian-a @ 26.881020
18 bulgarian @ 29.099802
19 finnish @ 30.100746
20 spaniard @ 34.761650

Using 4 populations approximation:
1 hungarian + mordovian + n-european + russian @ 1.284991
2 mordovian + russian + slovenian + utahn-white @ 1.312573
3 french + mordovian + russian + ukranian @ 1.329854
4 hungarian + mordovian + russian + utahn-white @ 1.354388
5 hungarian + mordovian + russian + utahn-white @ 1.371137
6 hungarian + russian + russian + utahn-white @ 1.451746
7 british + mordovian + russian + slovenian @ 1.464196
8 british + hungarian + mordovian + russian @ 1.549650
9 mordovian + russian + slovenian + utahn-white @ 1.584565
10 french + russian + russian + ukranian @ 1.589500
11 orcadian + russian + russian + serbian @ 1.593834
12 mordovian + n-european + russian + slovenian @ 1.614431
13 chuvash + hungarian + lithuanian + n-european @ 1.637670
14 lithuanian + mordovian + mordovian + spaniard @ 1.639786
15 hungarian + n-european + russian + russian @ 1.645707
16 chuvash + lithuanian + slovenian + utahn-white @ 1.686365
17 chuvash + french + lithuanian + ukranian @ 1.686449
18 french + russian + russian + slovenian @ 1.688131
19 mordovian + mordovian + slovenian + utahn-white @ 1.706048
20 chuvash + lithuanian + n-european + slovenian @ 1.708915


Оффлайн noman

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Re: Harappa Ancestry Project
« Ответ #33 : 07 Август 2017, 05:42:06 »
Admix Results (sorted):

#   Population   Percent
1   Baloch   41.16
2   S-Indian   30.60
3   Caucasian   12.77
4   NE-Euro   8.84
5   SW-Asian   2.42
6   Siberian   1.88


Finished reading population data. 377 populations found.
16 components mode.

--------------------------------

Least-squares method.

Using 1 population approximation:
1 kashmiri-pandit_reich @ 3.667443
2 punjabi-jatt-muslim_harappa @ 4.026411
3 punjabi_harappa @ 4.138089
4 sindhi_harappa @ 4.466750
5 punjabi-khatri_harappa @ 4.550765
6 punjabi-brahmin_harappa @ 5.173596
7 punjabi-arain_xing @ 5.174718
8 singapore-indian-c_sgvp @ 5.517751
9 kashmiri_harappa @ 5.574084
10 kashmiri-pahari_harappa @ 5.678083
11 punjabi-jatt-sikh_harappa @ 5.796974
12 pushtikar-brahmin_harappa @ 6.374290
13 punjabi-ramgarhia_harappa @ 6.477955
14 sindhi_hgdp @ 7.212249
15 gujarati-muslim_harappa @ 7.431384
16 bhatia_harappa @ 8.145923
17 pathan_hgdp @ 8.456666
18 rajasthani-brahmin_harappa @ 8.850918
19 up-muslim_harappa @ 9.079858
20 nepalese-a_xing @ 10.792697

Using 2 populations approximation:
1 50% punjabi-brahmin_harappa +50% sindhi_harappa @ 2.040554


Using 3 populations approximation:
1 50% pathan_hgdp +25% sindhi_harappa +25% tn-brahmin_xing @ 1.626832


Using 4 populations approximation:
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
1 kalash_hgdp + meghawal_reich + sindhi_harappa + sindhi_harappa @ 1.210598
2 iyengar-brahmin_harappa + kalash_hgdp + sindhi_harappa + sindhi_harappa @ 1.278694
3 kalash_hgdp + sindhi_harappa + sindhi_harappa + tn-brahmin_xing @ 1.288312
4 bhatia_harappa + kalash_hgdp + kerala-christian_harappa + sindhi_harappa @ 1.338000
5 iyer-brahmin_harappa + kalash_hgdp + sindhi_harappa + sindhi_harappa @ 1.338492
6 kalash_hgdp + kerala-nair_harappa + sindhi_harappa + sindhi_harappa @ 1.376081
7 gujarati_harappa + kalash_hgdp + sindhi_harappa + sindhi_harappa @ 1.478677
8 kalash_hgdp + kerala-nair_harappa + pathan_hgdp + sindhi_harappa @ 1.491721
9 ap-brahmin_xing + kalash_hgdp + sindhi_harappa + sindhi_harappa @ 1.497964
10 gujarati-b_hapmap + kalash_hgdp + sindhi_harappa + sindhi_harappa @ 1.506616
11 kalash_hgdp + meghawal_metspalu + pathan_hgdp + sindhi_harappa @ 1.528034
12 bhatia_harappa + kalash_hgdp + rajasthani_harappa + sindhi_harappa @ 1.531905
13 kalash_hgdp + maharashtrian_harappa + sindhi_harappa + sindhi_harappa @ 1.545255
14 kalash_hgdp + kerala-brahmin_harappa + punjabi-khatri_harappa + sindhi_harappa @ 1.550626
15 brahmin-tamil-nadu_metspalu + kalash_hgdp + sindhi_harappa + sindhi_harappa @ 1.555885
16 meghawal_reich + pathan_hgdp + sindhi_harappa + sindhi_harappa @ 1.576124
17 pathan_hgdp + sindhi_harappa + sindhi_harappa + tn-brahmin_xing @ 1.586345
18 bhatia_harappa + kalash_hgdp + meghawal_metspalu + pathan_hgdp @ 1.591122
19 kalash_hgdp + pathan_hgdp + sindhi_harappa + singapore-indian-b_sgvp @ 1.592838
20 goan_harappa + kalash_hgdp + sindhi_harappa + sindhi_harappa @ 1.594182

Done.

 

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