То же самое по локусам cнипам HLA-DQA1 и HLA-DQA2
Карта сцепления на этот раз не поместилась в сообщении.
Кому интересно, может взглянуть на это чудо вот здесь
http://image-upload.de/image/FORi7N/e6feb0cdde.png#captured 191 of 191 alleles at r^2 >= 0.8
#captured 100 percent of alleles with mean r^2 of 0.969
#using 65 Tag SNPs in 65 tests.
Allele Best Test r^2 w/test
rs9272426 rs9272426 1.0
rs2187668 rs9273327 0.944
rs17426593 rs17426593 1.0
rs1129765 rs1129765 1.0
rs9273012 rs9273012 1.0
rs6927022 rs6927022 1.0
rs17843593 rs17843608 0.97
rs17843604 rs17843608 0.835
rs17843608 rs17843608 1.0
rs9273327 rs9273327 1.0
rs34485459 rs34485459 1.0
rs35367950 rs17843608 0.98
rs9273349 rs17843608 0.98
rs7744001 rs7744001 1.0
rs6906021 rs6906021 1.0
rs1063355 rs17843608 1.0
rs9273448 rs3135006 0.959
rs2854275 rs9273327 1.0
rs3891175 rs3891175 1.0
rs2647025 rs2647025 1.0
rs3828796 rs3828796 1.0
rs9274689 rs3021058 0.871
rs9274741 rs3021058 0.812
rs3129782 rs3135006 1.0
rs1694112 rs9469219 0.816
rs17212090 rs9469219 0.816
rs9275141 rs3021058 0.971
rs2856695 rs3021058 0.961
rs3021058 rs3021058 1.0
rs17212420 rs9469219 0.816
rs4947342 rs4947342 1.0
rs2856692 rs4947342 1.0
rs2856688 rs4947342 1.0
rs3129716 rs9273327 1.0
rs4642516 rs3021058 0.98
rs7774434 rs7774434 1.0
rs7775228 rs7775228 1.0
rs9469219 rs9469219 1.0
rs9469220 rs9469220 1.0
rs2157051 rs3135006 0.816
rs9275219 rs9275390 0.975
rs9275224 rs6457617 1.0
rs2858324 rs2856717 0.969
rs9275245 rs6457617 1.0
rs6457617 rs6457617 1.0
rs6457620 rs6457617 1.0
rs2647012 rs2856717 0.948
rs2647003 rs2856717 0.969
rs9357152 rs9469219 0.816
rs10484561 rs35998847 0.921
rs2856664 rs16898264 0.969
rs9275312 rs9275312 1.0
rs2856725 rs2856717 0.948
rs35998847 rs35998847 1.0
rs3135006 rs3135006 1.0
rs9275356 rs3957146 1.0
rs2647046 rs2856717 1.0
rs9275374 rs9275390 0.987
rs9275375 rs9275390 0.95
rs9275383 rs3957146 1.0
rs1612904 rs2856717 0.821
rs9275388 rs9275390 0.975
rs9275390 rs9275390 1.0
rs9275393 rs9275390 0.987
rs2647050 rs16898264 1.0
rs9275406 rs9275390 0.987
rs2858308 rs2858308 1.0
rs9275407 rs9275390 0.987
rs9275408 rs9275390 0.938
rs9275418 rs9275390 0.95
rs2856718 rs16898264 1.0
rs2856717 rs2856717 1.0
rs2858305 rs2856717 1.0
rs35120848 rs35120848 1.0
rs9275424 rs9275390 0.987
rs9275425 rs9275390 0.987
rs9275427 rs9275390 0.95
rs2856705 rs2858308 1.0
rs9275428 rs9275390 0.987
rs13192471 rs35120848 1.0
rs9275439 rs9275390 0.95
rs9275464 rs9275390 0.975
rs17499655 rs35120848 1.0
rs2647049 rs2858308 1.0
rs9275517 rs2856717 0.838
rs9275522 rs9275595 0.958
rs9275523 rs9275595 1.0
rs9275524 rs2856717 0.838
rs12663935 rs12663935 1.0
rs12525220 rs12525220 1.0
rs9275555 rs9275595 0.958
rs16898264 rs16898264 1.0
rs17615250 rs16898264 1.0
rs9275572 rs2856717 0.838
rs3129727 rs3129727 1.0
rs9275582 rs9275595 1.0
rs7765379 rs7765379 1.0
rs7745656 rs7745656 1.0
rs2647087 rs7745656 1.0
rs2858333 rs7745656 1.0
rs2858332 rs2858332 1.0
rs2858331 rs2858331 1.0
rs9275595 rs9275595 1.0
rs7454108 rs3957146 1.0
rs3957146 rs3957146 1.0
rs2647089 rs7745656 1.0
rs9275596 rs2856717 0.812
rs3916766 rs7745656 1.0
rs3104402 rs3104402 1.0
rs3998159 rs3957146 0.977
rs3957148 rs3957146 0.977
rs3104404 rs3104404 1.0
rs2894381 rs2894381 1.0
rs3104405 rs3104405 1.0
rs9275601 rs9275601 1.0
rs3873444 rs3873444 1.0
rs9275602 rs9275602 1.0
rs3892710 rs3892710 1.0
rs3997854 rs3916765 0.884
rs6935940 rs5024431 0.962
rs6915986 rs6915986 1.0
rs6936863 rs5024431 0.987
rs9275614 rs3916765 1.0
rs5024431 rs5024431 1.0
rs9275618 rs3916765 0.976
rs5024432 rs5024432 1.0
rs3916765 rs3916765 1.0
rs3104398 rs3104401 0.805
rs9275653 rs9275653 1.0
rs3129736 rs9275772 1.0
rs12177980 rs9461799 1.0
rs9275659 rs9275936 0.984
rs9275660 rs9275936 1.0
rs3104401 rs3104401 1.0
rs9275686 rs9275936 1.0
rs9275698 rs4394270 0.893
rs9275765 rs9275772 0.961
rs9275766 rs9275766 1.0
rs9275772 rs9275772 1.0
rs9461799 rs9461799 1.0
rs9469240 rs9461799 0.971
rs9275793 rs9275772 0.961
rs2395237 rs9461799 0.97
rs763026 rs9275936 1.0
rs2395246 rs3104401 1.0
rs9469246 rs9461799 0.951
rs9275936 rs9275936 1.0
rs28772340 rs9461799 0.951
rs2858892 rs9461799 0.97
rs12528892 rs12528892 1.0
rs9276017 rs9275772 0.961
rs5029394 rs9275772 0.961
rs2859054 rs9461799 1.0
rs9276137 rs9275772 0.961
rs2859112 rs9461799 1.0
rs2859110 rs2859110 1.0
rs9276157 rs9275772 0.961
rs9276162 rs9275772 1.0
rs9276171 rs9275936 0.937
rs2859099 rs2859099 1.0
rs9276197 rs9276432 0.876
rs9276227 rs3104401 0.964
rs9276234 rs9276432 0.876
rs2859078 rs9275936 0.968
rs9276298 rs9275772 0.947
rs9276299 rs3104401 0.964
rs2858881 rs2858881 1.0
rs7762228 rs7762228 1.0
rs9276310 rs3104401 0.946
rs13214069 rs9461799 0.951
rs13199787 rs9461799 0.951
rs7773149 rs9276432 0.886
rs6457644 rs9461799 0.97
rs7773068 rs9275772 0.947
rs7773694 rs9275772 0.947
rs7773407 rs9461799 0.951
rs7755596 rs9275772 0.947
rs9276370 rs9276432 0.866
rs9276399 rs3104401 0.946
rs4394270 rs4394270 1.0
rs2213568 rs9276432 0.98
rs2213567 rs9276432 0.932
rs9276427 rs9276432 0.835
rs9276429 rs9276432 1.0
rs9276431 rs9276432 1.0
rs9276432 rs9276432 1.0
rs17500510 rs17500510 1.0
rs9469266 rs9469266 1.0
rs2213565 rs9275772 0.947
rs2239800 rs2239800 1.0
rs9276435 rs9275936 0.806
Test Alleles Captured
rs9275390 rs9275406,rs9275388,rs9275425,rs9275374,rs9275390,rs9275375,rs9275424,rs9275407,rs9275427,rs9275428,rs9275408,rs9275464,rs9275439,rs9275393,rs9275418,rs9275219
rs9275772 rs9276017,rs7773694,rs9276157,rs7755596,rs9276137,rs3129736,rs9276298,rs5029394,rs2213565,rs9275793,rs9275765,rs9276162,rs7773068,rs9275772
rs9461799 rs2859054,rs28772340,rs7773407,rs6457644,rs2858892,rs12177980,rs9469240,rs9469246,rs9461799,rs2859112,rs13199787,rs2395237,rs13214069
rs2856717 rs2858305,rs2856725,rs9275596,rs1612904,rs9275524,rs2647012,rs9275572,rs2858324,rs2647046,rs2856717,rs9275517,rs2647003
rs9276432 rs9276197,rs9276432,rs9276431,rs9276429,rs2213568,rs7773149,rs9276427,rs9276370,rs2213567,rs9276234
rs9275936 rs9275686,rs9275660,rs2859078,rs9276171,rs763026,rs9275936,rs9276435,rs9275659
rs3104401 rs9276299,rs3104401,rs9276227,rs2395246,rs3104398,rs9276310,rs9276399
rs3957146 rs3957148,rs3998159,rs7454108,rs9275356,rs3957146,rs9275383
rs17843608 rs17843604,rs1063355,rs35367950,rs17843608,rs9273349,rs17843593
rs3021058 rs9275141,rs9274689,rs4642516,rs3021058,rs9274741,rs2856695
rs9469219 rs9357152,rs1694112,rs9469219,rs17212090,rs17212420
rs16898264 rs2856718,rs16898264,rs2856664,rs17615250,rs2647050
rs9275595 rs9275582,rs9275523,rs9275522,rs9275555,rs9275595
rs7745656 rs2647087,rs7745656,rs2647089,rs2858333,rs3916766
rs3135006 rs3135006,rs9273448,rs3129782,rs2157051
rs3916765 rs3997854,rs3916765,rs9275618,rs9275614
rs9273327 rs3129716,rs2854275,rs2187668,rs9273327
rs6457617 rs6457620,rs6457617,rs9275245,rs9275224
rs5024431 rs6936863,rs6935940,rs5024431
rs4947342 rs2856688,rs2856692,rs4947342
rs2858308 rs2647049,rs2858308,rs2856705
rs35120848 rs13192471,rs35120848,rs17499655
rs35998847 rs10484561,rs35998847
rs4394270 rs4394270,rs9275698
rs7762228 rs7762228
rs9469266 rs9469266
rs12525220 rs12525220
rs7765379 rs7765379
rs3104404 rs3104404
rs2859110 rs2859110
rs7775228 rs7775228
rs6927022 rs6927022
rs12663935 rs12663935
rs2647025 rs2647025
rs3891175 rs3891175
rs2858332 rs2858332
rs9275312 rs9275312
rs2858331 rs2858331
rs12528892 rs12528892
rs9275766 rs9275766
rs17500510 rs17500510
rs7744001 rs7744001
rs2239800 rs2239800
rs1129765 rs1129765
rs3104402 rs3104402
rs3892710 rs3892710
rs9273012 rs9273012
rs3129727 rs3129727
rs9469220 rs9469220
rs5024432 rs5024432
rs2859099 rs2859099
rs6915986 rs6915986
rs9275653 rs9275653
rs2858881 rs2858881
rs9272426 rs9272426
rs3828796 rs3828796
rs2894381 rs2894381
rs3873444 rs3873444
rs34485459 rs34485459
rs7774434 rs7774434
rs3104405 rs3104405
rs9275601 rs9275601
rs17426593 rs17426593
rs6906021 rs6906021
rs9275602 rs9275602